Conda Updates


2017-04-05

Data collections Updates

  • Expansion of MERRA-2 collection at NCI with the inst3d_3d_asm_Np data. View MERRA-2 page

UM10.6 GA7


LROSE

module use /g/data3/hh5/public/modules
module load lrose

Conda Updates

  • Several packages have been added to the public Anaconda environments https://accessdev.nci.org.au/trac/wiki/User%20Guides/conda
    • metpy: MetPy is a collection of tools in Python for reading, visualizing and performing calculations with weather data.
    • windspharm: windspharm is a Python package for performing computations on global wind fields in spherical geometry.
    • python-cdo: Python bindings for CDO
    • pyart: The Python ARM Radar Toolkit
    • bokeh: Bokeh is a Python interactive visualization library that targets modern web browsers for presentation.

2017-03-17

Python libraries at NCI

  • We've moved the Python libraries installed with Miniconda to a public space (/g/data3/hh5/public/modules) so there is no need anymore to be part of ACCESS to use it. See the updated instructions

UM Newsletter

Massdata utility

  • Are you moving data to/from massdata? Are you having issues with the copy stopping in the middle of things and impossibility to restart from where it failed? Aidan wrote a small utility to help with that. It’s available to anyone, info: https://github.com/coecms/mdssdiff

2017-02-15


MPAS-Atmosphere

  • The latest release of MPAS-Atmosphere has been installed on Raijin. This model will probably supplant WRF sometime in the future.

Python libraries at NCI

  • We've installed some Python libraries using Miniconda in /g/data1/access. The aim is to facilitate access to and management of commonly used Python libraries on Raijin, Accessdev and VDI. It also enables users to locally install their own libraries using Miniconda without duplicating the centrally installed libraries. For the moment, users have to be part of the ACCESS group on Raijin to use these (if you are not, just ask access on my.nci.org.au) but we plan to make it public access. More details are here.

Sharing facility at NCI

  • We worked at NCI to enable users to share data stored on Raijn with collaborators who don't have access to NCI. This is aimed for work in progress which can not be published and opened publicly. The files are accessible for a short time only to allow your collaborators to download them to their own storage. We are working on making it user-friendly but if you need to share some data in the meantime, please ask climate_help@nci.org.au.

Updating OpenMPI library for MOM

  • After the new quarter maintenance, some MOM jobs experienced some stalling behaviour at the end of the job. This mainly affect large configurations (0.1°). The fix is to recompile MOM using the openmpi/10.2.1 version. If you don't know whether you should worry about it or how to recompile, please contact climate_help@nci.org.au.

NU-WRF

  • The latest manual is now on the CMS wiki. Just follow the NU-WRF link in the navigation sidebar.

2016-08-22


Configurations


UM

  • The Accesscollab UMUI server is no longer supported, and we can't guarantee the safety of data on it. Please move any data on the 'Collab' page of the UMUI to the 'Accessdev' or 'Collab(local)' page. The 'Collab (local)' page contains copies of the Accescollab database from last year, if your jobs are present there no further action is required.
    To move an experiment folder right click on it and select 'copy' then go to the 'accessedev' or 'collab(local)' page and use the 'paste' button in the top right of umuix to copy all jobs in that folder.
  • NIWA's um2netcdf.x conversion script is now available as ACCESS module um2netcdf-niwa https://github.com/adeytown/um2netcdf